Proteus-Analytics™ is a tightly integrated solution that combines GenoLogics’ Proteus™ and Proteome Software’s ScaffoldBatch Analysis System, resulting in a powerful lab and data management solution with unsurpassed integration and protein analysis capabilities. Proteus-Analytics makes high throughput, high accuracy proteomics research manageable. This solution bundle provides automated bioinformatics pipelining, protein search engine integration, automated and manual peptide validation, and results visualization, to increase the efficiency and accuracy of your proteomics research.

Automated Informatics (AI) Framework

• Enables automatic bioinformatics pipelining of proteomics data, and facilitates Proteus’ close integration with the ScaffoldBatch Analysis System.

Improved Confidence in Protein Validation

• Using the AI Framework, Proteus queues protein search results data from Mascot and X! Tandem protein search engines into the ScaffoldBatch Analysis system. Scaffold uses statistical scoring models to provide improved confidence in validating protein ID data.

Scaffold’s validation tactics include visually checking for repeatability of the proteins across samples, peptides within proteins across samples, and the spectral fragmentation peaks across peptides. An additional visual validation tool confirms that the peptide’s amino acids and post translational modifications are consistent with the fragmentation peaks in the spectra.

Proteus automatically captures validation results and parses them into its database. Users can then launch the Scaffold Viewer for results viewing and dissemination to collaborators through the LabLink web collaboration system. The finalized results are integrated into the Proteus database for queries, reporting and data mining.

Proteus seamlessly integrates to the ScaffoldBatch Analysis System

Proteus-Analytics is a complete lab and data management solution with protein visualization and analytics capabilities. It acts as a lab’s digital nervous system - connecting all your scientific data, experiments, instrumentation, bioinformatics tools, and collaborators - enabling accelerated discovery. This bundled solution couples lab and data management with sophisticated analysis capabilities providing an end-to-end proteomics solution for lab managers, PIs, lab techs and bioinformaticians.

The ScaffoldBatch Analysis System handles protein validation and visualization while Proteus tracks samples through complex workflows and manages processing steps including aliquoting, fractionating, pooling, labeling, mass spectrometry, and data analysis; contextually associates data, and manages data transfer to and from external collaborators. The resulting Proteus-Analytics solution provides an unparalleled LIMS and validation and visualization capabilities for clinical proteomics and biomarker discovery research.

See how Proteus-Analytics can benefit your lab

The above only provides a brief overview of the benefits of Proteus-Analytics in your proteomics research lab.

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Proteus-Analytics Highlights

Explore Proteus-Analytics, a new bundled solution from GenoLogics. Proteus-Analytics features a lab and data management component and protein and peptide validation analytics component.

Scientific Poster: A Flexible, Integrated ad Robust LIMS Informatics Pipeline with Research Analytics Views at Scripps Florida